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/***
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<!--{{{-->
<div class='header' macro='gradient vert [[ColorPalette::PrimaryLight]] [[ColorPalette::PrimaryMid]]'>
<div class='headerShadow'>
<span class='siteTitle' refresh='content' tiddler='SiteTitle'></span>&nbsp;
<span class='siteSubtitle' refresh='content' tiddler='SiteSubtitle'></span>
</div>
<div class='headerForeground'>
<span class='siteTitle' refresh='content' tiddler='SiteTitle'></span>&nbsp;
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</div>
</div>
<div id='mainMenu' refresh='content' tiddler='MainMenu'></div>
<div id='sidebar'>
<div id='sidebarOptions' refresh='content' tiddler='SideBarOptions'></div>
<div id='sidebarTabs' refresh='content' force='true' tiddler='SideBarTabs'></div>
</div>
<div id='displayArea'>
<div id='messageArea'></div>
<div id='tiddlerDisplay'></div>
</div>
<!--}}}-->
<!--{{{-->
<div class='toolbar' macro='toolbar [[ToolbarCommands::ViewToolbar]]'></div>
<div class='title' macro='view title'></div>
<div class='subtitle'><span macro='view modifier link'></span>, <span macro='view modified date'></span> (<span macro='message views.wikified.createdPrompt'></span> <span macro='view created date'></span>)</div>
<div class='tagging' macro='tagging'></div>
<div class='tagged' macro='tags'></div>
<div class='viewer' macro='view text wikified'></div>
<div class='tagClear'></div>
<!--}}}-->
<!--{{{-->
<div class='toolbar' macro='toolbar [[ToolbarCommands::EditToolbar]]'></div>
<div class='title' macro='view title'></div>
<div class='editor' macro='edit title'></div>
<div macro='annotations'></div>
<div class='editor' macro='edit text'></div>
<div class='editor' macro='edit tags'></div><div class='editorFooter'><span macro='message views.editor.tagPrompt'></span><span macro='tagChooser excludeLists'></span></div>
<!--}}}-->
To get started with this blank [[TiddlyWiki]], you'll need to modify the following tiddlers:
* [[SiteTitle]] & [[SiteSubtitle]]: The title and subtitle of the site, as shown above (after saving, they will also appear in the browser title bar)
* [[MainMenu]]: The menu (usually on the left)
* [[DefaultTiddlers]]: Contains the names of the tiddlers that you want to appear when the TiddlyWiki is opened
You'll also need to enter your username for signing your edits: <<option txtUserName>>
These [[InterfaceOptions]] for customising [[TiddlyWiki]] are saved in your browser

Your username for signing your edits. Write it as a [[WikiWord]] (eg [[JoeBloggs]])

<<option txtUserName>>
<<option chkSaveBackups>> [[SaveBackups]]
<<option chkAutoSave>> [[AutoSave]]
<<option chkRegExpSearch>> [[RegExpSearch]]
<<option chkCaseSensitiveSearch>> [[CaseSensitiveSearch]]
<<option chkAnimate>> [[EnableAnimations]]

----
Also see [[AdvancedOptions]]
<<importTiddlers>>
AbnerCYH is the maintainer of this webpage. His chinese name is ''黃智沂''. You can find his contact infomation of [[Members]].

''Any advices are welcome.''
''An efficient RNA interference screening strategy for gene functional analysis''
~Chih-Hung Chang, ~Hsiang-Iu Wang, ~Hsiang-Chia Lu, ~Cheng-En Chen, ~Hong-Hwa Chen, ~Hsin-Hung Yeh, Chuan Yi Tang
''Under Review''

<<<
For this project, we collaberated with prof. [[Hsin-Hung Yeh|http://homepage.ntu.edu.tw/~ppm/ppm_english/Faculty&Research/tc_10_Yeh,Hsin-Hung.htm]]'s group in NTU. We also developed the softeware which is publicly available to everybody. If you are interested in our software, please contact the first author, [[Chih-Hung Chang|mailto://d948311@oz.nthu.edu.tw]], to request a copy of source code.
! Last Update: 2009-04-24

唐老師規定實驗室成員借閱書籍有分:原文書應借閱"影印本"、中文書可藉原版書。借閱 Room 5-18 書櫥之書籍請跟助理(明芳)登記。

!! 實驗室電子書
目前由 Abner Chih Yi Huang 維護
查詢網頁為 [[ebooks|ebooks.php]] (鎖實驗室IP,校外或宿舍請用 VPN)
 

!! Room 5-18 書櫥
[[書籍明細|books.php]]

!!Room 5-12 書櫥

''Book''
Introduction to Algorithms
The probabilistic method
Introduction to the design and analysis of algorithms
Computational Geometry for Design and Manufacture
Algorithmic Graph Theory and Perfect Graphs
Computational Complexity of Sequential and Parallel Algorithms
Bioinformatics: Sequence and Genome Analysis
Programming Pearls
PHP 4 互動式網頁資料庫
PHP 程式設計專家必備手冊
實用C程式語言--入門篇

''Proceeding4''
18th ICPR Volume 1
18th ICPR Volume 2
18th ICPR Volume 3
18th ICPR Volume 4
18th ICPR Supplemental *2
18th ICPR Final Program *2
Symposium of the National Research Program for Genomic Medicine (V)
FOCS 81~90
STOC 82~89 少87
SODA 91~94
Algorithmica 1998 vol 3 no 3
Algorithmica 1998 vol 3 no 1
Algorithmica 1998 vol 2 no 1
ISAAC 93
19th Workshop on Combinatorial Mathematics and Computation Theory
Symposium on Computational Geometry 85~92 少86,90
International Journal of Computational Geometry and Application 1993 Volume 3 No 3
International Conference on Parallel Processing 90~91 81~88 76~77
Parallel Processing Letters 1993 Volume 3 no 3
Supercomputing 89~92
Hypercube Multiprocessor 86, 87
ICS 90, 92
ICPADS 90, 93, 94
SHPCC 92
Workshop on Systolic Array

''Thesis''
在分散式記憶體的多重電腦之中得到細粒平行度
基於類神經網路與向量支持機的階層式學習架構及其餘蛋白質結構分類之應用
*[[Algorithm & Biocomputing LAB|http://alg.csie.ncnu.edu.tw/index1.html]] of Dept. of Computer Science and Information Engineering, National Chi Nan University.
*[[Bioinformatic Algorithm Laboratory|http://www.cc.nctu.edu.tw/~cllu/]] of Institute of Bioinformatics, National Chiao Tung University.
*[[Laboratory of Algorithms and Data Structures design|http://loads.cs.nthu.edu.tw/]], National Tsing Hua University
* Location: 國立清華大學資訊工程學系,計算系統生物與醫學實驗室,台達館七樓,711室,712 室,新竹市光復路二段101號。
* Location: Computational Systems Biology and ~Bio-Medicine Laboratory, Dept. of Computer Science, National Tsing Hua University. Room 711 and 712, Delta Building, no.101, Sec. 2, Kuang Fu Rd., Hsin Chu, Taiwan, 30013, R.O.C..
* Mail Address: (300) 新竹市光復路二段101號,國立清華大學資訊工程學系,計算系統生物與生物醫學實驗室。
* Mail Address: Computational Systems Biology and ~Bio-Medicine Laboratory, Department of Computer Science, National Tsing Hua University, 101, Kuang Fu Rd, Sec.2, ~HsingChu, Taiwan 300 R.O.C
* TEL: 
* TEL: 
* FAX: 
Links to courses offered by members of AB Lab
! Fall 2009
* ''實驗室新生訓練''[[Slides|CSBBLAB2009Training.htm]]

! Fall 2007
* ''系統生物學概論 Introduction to Systems Biology'', Prof. Chuan Yi Tang, Prof. Yung Jen Chunag, Prof. David Shan Hill Wong, [[CourseWeb|http://algorithm.cs.nthu.edu.tw/~ISA5101/2005]]
* ''計算方法專題二 Special Topics in Algorithms II'', Prof. Chuan Yi Tang.
* ''計算機系統管理 Computer System Administration'', 張君天 [[CourseWeb|http://kitty.2y.idv.tw/csa/]]
! Spring 2006 
* ''計算方法設計 Design and Analysis of Algorithms'', Prof. Chuan Yi Tang, [[CourseWeb|http://algorithm.cs.nthu.edu.tw/~course/]]
* ''計算生物學 Computing Biology'', Prof. Chin Lung Lu, Prof. Chuan Yi Tang, [[CourseMaterials|http://www.csie.ncnu.edu.tw/~rctlee/biology.html]] 
* ''計算方法專題二 Special Topics in Algorithms II'', Prof. Chuan Yi Tang.
* ''計算機系統管理 Computer System Administration'', 張君天 [[CourseMaterials|ftp://kitty.2y.idv.tw/pub/NTHU_CS/Computer_System_Administration]]
! Fall 2005
* ''計算方法專題一 Special Topics in Designs of Algorithms I'', Prof. Chuan Yi Tang
* ''系統生物學概論 Introduction to Systems Biology'', Prof. Chuan Yi Tang, Prof. Yung Jen Chunag, Prof. David Shan Hill Wong, [[CourseWeb|http://algorithm.cs.nthu.edu.tw/~ISA5101/2005]] (Password Required)
[[Welcome]]
[[Information for Prospective Graduate Students and Interns]]

[[LabComm.]]
ContactUs
''Recommanded Articles''
Some undergraduate-level articles make you know more about our works.
*[[The Small-World Phenomenon and Decentralized Search|http://www.mathaware.org/mam/04/essays/smallworld.pdf]], by Jon Kleinberg, SIAM News, Volume 37, Number 3, April 2004
* [[閑話神經科學(10) 網絡新世界 社會網絡分析(Social Network Analysis)|http://neuroscience.ntu.edu.tw/ep/10.htm]], 謝豐舟教授
*[[An Introduction to Bioinformatics Algorithms|http://www.amazon.com/exec/obidos/tg/detail/-/0262101068/qid=1124392640/sr=8-1/ref=pd_bbs_1/104-8366430-9987927?v=glance&s=books&n=507846]] by Jones and Pevzner.
* The relationship of computational biology, algorithms and complexity : [[A schematic view of Algorithms and Complexity|http://www.cs.princeton.edu/~arora/theorypage/junk/blumdefn.pdf]], by Avrim Blum.
* [[生物資訊學簡介|http://bioinfo.nchc.org.tw/modules.php?name=Content&pa=showpage&pid=2]], 謝昌煥, 國網中心生物知識庫與生物資訊系統.
* [[Bioinformatics and computational biology|http://en.wikipedia.org/wiki/Bioinformatics]] - Wikipedia, the free encyclopedia.
* [[Systems biology|http://en.wikipedia.org/wiki/Systems_biology]] - Wikipedia, the free encyclopedia
* [[Empirical Methods in CS and AI|http://www-users.cs.york.ac.uk/%7Etw/empirical.html]], collected by Toby Walsh
* [[On The Emerging Future of Complexity Sciences|http://www.acm.org/ubiquity/views/v7i10_complexity.html]], by Kemal A. Delic & Ralph Dum , Ubiquity (ACM's IT opinion magazine)
* Harvard multimedia: [[The Inner Life of a Cell|http://www.youtube.com/watch?v=_H1S9d5h-Ps]]. SIGGRAPH AWARD WINNING ANIMATION.
* Baxter SM, Day SW, Fetrow JS, Reisinger SJ (2006) [[Scientific Software Development Is Not an Oxymoron|http://compbiol.plosjournals.org/perlserv/?request=get-document&doi=10.1371/journal.pcbi.0020087]]. PLoS Comput Biol 2(9): e87
* [[An Introduction to Drug Discovery and Development|http://www.netsci.org/About/index.html]], Network Science Center

More about [[algorithms|theory.html#AboutAlgorithms]] | [[systems biology|]]
! 2012 100學年度本實驗室成員共有 3 位取得博士學位,恭喜各位

100學年度本實驗室成員共有 3 位取得博士學位,名單如下:
>張君天,林沿妊,黃智沂

與碩士班聯合謝師宴於 2012-06-10 假國賓飯店八方齋舉行

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<img src="LabPhoto/2012-06-10/576761_4195335960954_526387403_n.jpg" width=80% /><br />
<img src="LabPhoto/2012-06-10/301708_4195338921028_175952070_n.jpg" width=80% /><br />
<img src="LabPhoto/2012-06-10/601698_4195294359914_1594812560_n.jpg" width=80% /><br />
<img src="LabPhoto/2012-06-10/208916_4195282359614_101623447_n.jpg" width=80% /><br />
<img src="LabPhoto/2012-06-10/292107_4195284999680_2022350809_n.jpg" width=80% /><br />
<img src="LabPhoto/2012-06-10/382446_4195282799625_1664537224_n.jpg" width=80% /><br />
<img src="LabPhoto/2012-06-10/551182_4195284279662_601826463_n.jpg" width=80% /><br />
<img src="LabPhoto/2012-06-10/560362_4195292239861_1303664203_n.jpg" width=80% /><br />
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! 2011 恭喜 齊孝傑獲得 2011 NCHC HPC研討會 成果海報特優獎

[[NCHC HPC研討會|http://event.nchc.org.tw/2011/hpc_user/index.php]]
>為促進國內高速計算科研發展與學術交流,推廣國網中心最新研發應用,本中心將於11月24日舉辦「2011 NCHC HPC研討會」,歡迎各界高速計算學者與相關領域先進踴躍參與,分享最新高速計算研究成果與技術交流。

<html>
<center><img src="news2011.jpg" width=80% /></center>
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! 2010 99學年度本實驗室成員共有 6 位取得博士學位,恭喜各位學長姐

99學年度本實驗室成員共有 6 位取得博士學位,名單如下:
>李孝屏, 朱家漢, 徐婕婷, 彭士齊, 黃彥菱, 石貴中


! 2010 恭喜唐傳義教授將接靜宜校長

[[落實天主是愛的精神 為社會及教會培育有行動力的知識份子|http://web.pu.edu.tw/~pu10420/punews/99/news0730-1.html]]
>靜宜大學7月30日舉行校長交接典禮暨祈福彌撒,從董事長蘇耀文主教及卸任校長俞明德手中接下印信的新任校長唐傳義教授表示,未來要展現靜宜的特色,與所有同仁在教學、研究、輔導等工作,共同落實「天主是愛」的精神,為社會及教會培育有行動力的知識份子。
>
>靜宜大學前董事長王愈榮主教指出,靜宜大學自主顧修女會蓋夏姆姆創校以來,經過歷屆董事會、校長及老師及同仁們的努力,在教學、研究及服務學習上已獲得相當豐碩的成果,在發揮天主教的精神上也很有成就。我們為新任唐傳義校長祝福,希望在聖神的領導下,在各位教授及同仁的協助下,使靜宜更上層樓,成為卓越的天主教大學。

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<center><img src="http://web.pu.edu.tw/~pu10420/punews/99/news0803-1-1.jpg " /></center>
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! 2009 經濟日報 清大唐傳義研發團隊 研發「新型抗癌標靶抑制劑」

經濟日報 2009/10/19 10:03
[[清大唐傳義研發團隊 研發「新型抗癌標靶抑制劑」|http://edn.gmg.tw/news/view.jsp?aid=197181&cid=47]]
>由清大資訊工程學系教授唐傳義帶領博士生石貴中,並結合中興大學、彰化師範大學共同研發的「新型抗癌標靶抑制劑」,目前已有相當成果,將技轉給生技公司及生技製藥廠。

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<center><a href="http://edn.gmg.tw/news/view.jsp?aid=197181&cid=47"><img src="news20091020.png" /></a></center>
</html>
''Meeting Informations of Bioinformatics and Algorithms Lab of C.Y. Tang''
* [[Portal|http://algorithm.cs.nthu.edu.tw/meeting/]]
* [[List of Reporters|http://algorithm.cs.nthu.edu.tw/meeting/seminar_table.htm]]
* [[Schedule|http://algorithm.cs.nthu.edu.tw/meeting/seminar_table.htm]]
Besides the [[group|WorkGroups]] meetnings, there are two main meetings of our Lab, i.e., the Lab meeting and [[LEAST Seminar|Seminars]]. Currently, ''the organizer is [[Chih Shan Liu|mailto://d9562833@oz.nthu.edu.tw]]''. Please mail to her for any questions about Lab meeting and [[LEAST Seminar|Seminars]].

The folloing quote is from the Liu's inner mail. Please follows those requirements.

<<<
報告順序的安排,若是有人主動提報告時間為最優先。

若都沒人主動,我的順序是按照離上次報告最遠的人開始排。

並避開需要資格考的成員的前八週與後四週,

於每月底寄發通知信通知下兩個月應報告成員。



我會在學期開始前至少一個月將本學期的報告順序排定,

請各位至少要在輪到自己的一個半月前(即6週)提出延後的要求。

較能避免順序調動造成對其他人無預期提前而準備時間不足的困擾,

更改後的次序我會直接在網頁上更改。

 

若是臨時有事,則煩請自行與實驗室其他成員協調,

若對方已在名單上,採報告日期對換的方式。

若對方不在名單上,則煩請寄給我下次確認能夠報告的時間。
<<
[[Welcome]]

''About CSBB Lab''
[[Members]]
WorkGroups
[[Projects]]
[[Publications]]
[[Photos]]
[[Videos]]

''Events''
[[LabComm.]]
[[Seminars]]
LabMeetings

''Resources''
[[Conferences|http://algorithm.cs.nthu.edu.tw/C4P]]
[[Webmail|http://algorithm.cs.nthu.edu.tw/webmail]]
[[Courses]]
[[Server|http://algorithm.cs.nthu.edu.tw/resource]]
[[Books]]
[[Tools]]

''Links''
[[Collaborations]]
[[Useful URLs]]


''[[RSSFeed|index.xml]]''

ContactUs
[[Maintainer|#AbnerCYH]]
[[EditManual|http://www.blogjones.com/TiddlyWikiTutorial.html#EasyToEdit]]
[[ReUse|empty.html]]

This site uses [[TiddlyWiki|http://www.tiddlywiki.com/]] 2.5.3

[img[mark|school_mark.png]]
!Current Members
| !Name | !English Name | !Contact | !areas of interest |
| 唐傳義教授 | [[Prof. Tang]] | cytang@cs.nthu.edu.tw | analysis and design of algorithms, computational molecular biology, parallel processing and computer aided engineering. |
| 石貴中博士 (postdoc) | | shiuh0307@seed.net.tw | Drug Design |
| 李雅雪 | | liyh@mx.nthu.edu.tw | R.A. |
|>|>|>| ''Ph.D Program Students'' |
| 林沿妊 | | d928307@oz.nthu.edu.tw | [[Systems Biology group]] |
| [[張君天|http://kitty.2y.idv.tw]] | | tcs@kitty.2y.idv.tw | [[GFESS group]] |
| [[王翔昱|http://blog.yam.com/russdiyan]] | Russ Hsiang-iu Wang | d936319@oz.nthu.edu.tw | [[Systems Biology group]] |
| 劉俊毅 | | d938332@oz.nthu.edu.tw | |
| 王鴻昌 | | d938346@oz.nthu.edu.tw | |
| 鄭佳揚 | | d938341@oz.nthu.edu.tw | [[GFESS group]] |
| 賴俊吉 | | d938345@oz.nthu.edu.tw | [[GFESS group]] |
| 張智宏 | | d948311@oz.nthu.edu.tw | [[GFESS group]] |
| 林柏亨 | | d948334@oz.nthu.edu.tw | [[GFESS group]] |
| 古天雄 | | 21203@cch.org.tw | |
| 劉行琨 | | hsiungkl@libra.seed.net.tw | |
| [[陳昱廷|http://algorithm.cs.nthu.edu.tw/~wayne/]] | Yu Tin Chen | g936742@oz.nthu.edu.tw | [[GFESS group]] |
| 黃筌敬 | Chuan Ching Huang | d9562861@oz.nthu.edu.tw | [[GFESS group]] |
| 劉至善 | Joyce Liu | d9562833@oz.nthu.edu.tw | [[Theory Group]] |
| [[黃智沂|http://kitty.2y.idv.tw/~abner/ccTiddly-v1.1finalc/#Contact]] | Chih Yi Huang | abnercyh@gmail.com |  [[Theory Group]],[[GFESS group]]  |
| 李季青 | ~Chi-Ching Lee | d9662841@oz.nthu.edu.tw | [[GFESS group]] |
| 謝明峰 | | d9562563@oz.nthu.edu.tw | [[Systems Biology group]] |
| 歐忠維 | | jongwaye@gmail.com | [[Systems Biology group]] |
| 馬誠佑 | | brainbear@gmail.com | [[GFESS group]] |
| 廖基復 | | fjliao@gmail.com | [[GFESS group]] |
| 翁正軒 | | callmemj@hotmail.com | |
| 林益洲 | | linyichou168@gmail.com | |
| 齊孝傑 | | jakeyfun@gmail.com | |
|>|>|>| ''Master Program Students'' |
| 姚孜融 | | kyyzr99405@gmail.com | [[GFESS group]] |
| 羅子澄 | | germengx@yahoo.com.tw | [[GFESS group]] |
| 張馨文 | | papacan18@yahoo.com.tw | [[GFESS group]] |
| 孫敬倫 | | abc95199@hotmail.com | [[GFESS group]] |
| 林郁珊 | | b953040005@gmail.com | Drug Design |
| 黃建霖 | | | [[GFESS group]] |

!Former Members
''Ph.D. Program Students''

| !Name | !English Name | !Contact | !areas of interest |
| [[梁秋國|http://pdlab.csie.chu.edu.tw/labweb/teacher-ck.htm]] (78) | | | 算法分析與設計、平行處理、分散式計算 |
| 胡大雄 (79) | | 銘傳大學 | |
| [[蕭如淵|http://www.csie.ncue.edu.tw/~hsiaojy/jyhsiao.htm]] (80) | | | 影像處理、資訊安全、演算法設計分析、圖形理論, 電子商務安全、多媒體系統 |
| [[蔡英德|http://ubsd.cs.pu.edu.tw/~yttsai]] | Prof. Yin Te Tsai | | Algorithms, Bioinformatics, Information System, Computer Aided Education |
| [[陳文輝|http://reg.aca.ntu.edu.tw/college/search/gradshow.asp?gid=020013]] (82) | | | 網路通訊協定設計與分析、資訊安全 |
| 顏重功 (84) | | 世新大學 | |
| 曾紹崟 (84) | | | |
| 徐道中 (85) | | | |
| [[盧錦隆|http://www.cc.nctu.edu.tw/~cllu/]] | Prof. Chin Lung Lu | | Design and Analysis of Algorithms, Bioinformatic Algorithms, Combinatorial Optimization Algorithms, Graph Algorithms |
| [[方覺非| http://www.ntcu.edu.tw/dct/dctc/teacher/teachers_6.html]] (87) | | | 資料結構、演算法、平行計算、分散式計算、生物計算 |
| [[吳邦一|http://www.pws.stu.edu.tw/bangye/]] | Prof. Bang Ye Wu | 樹德科大 | algorithms, approximation algorithms, computational biology |
| [[彭勝龍|http://gba.csie.ndhu.edu.tw/index.php?board=professor]] (87) | | | 演算法設計、圖形理論、生物計算 |
| 呂柏寬 (87) | | | |
| [[吳坤熹|http://solomon.ipv6.club.tw/ncnu.html]] (88) | | 暨南國際大學 | VoiceXML, Authoring System, Anti-Spam Call Processing, Steganography, P2P VoIP/IM |
| 吳文哲 (88) | | | |
| 呂芳誠 (89) | | | |
| [[陳彥宏|http://www.im.nttu.edu.tw/teacher.php?id=30]] (95) | Prof. Yen Hung Chen | | 演算法設計與分析、計算生物與生物資訊、資料探採、 圖論、計算理論、協定工程測試 |
| 謝淑茹 (95) | | | 比較基因體學 |
| [[林英志|http://algorithm.cs.nthu.edu.tw/~linian/]] (96) | Dr. Ying Chih Lin | | Computational Biology, Approximation Algorithm, Combinatorial or Graph Problems |
| 鍾允昇 (96) | | | Data Fusion |
| 彭千華 (97) | | | Systems Biology |
| 李孝屏 (99) | | | |
| 朱家漢 (99) | | d938301@oz.nthu.edu.tw | 蛋白質結構比對 |
| 徐婕婷 (99) | | | Systems Biology |
| [[彭士齊|http://shihchi.cs.nthu.edu.tw/]] (99) | Shih Chi Peng | shihchi@url.com.tw | Systems Biology |
| 黃彥菱 (99) | | d948307@oz.nthu.edu.tw |  |
| 石貴中 (99) | | shiuh0307@seed.net.tw | Drug Design |



''Master Program Students''
| [[楊翊文|http://sites.google.com/site/darkbearman/]] (94) | ~Ei-Wen Yang | | 楊巧筠 (94) | | |
| 張成鈺 (94) | | | 方忠和 (94) | | |
| 蔡宗佑 (94) | | | 黃振臺 (95) | | g936325@oz.nthu.edu.tw |
| 劉盈銓 (95) | | g934313@oz.nthu.edu.tw | 蔡皓璿 (95) | | g934390@oz.nthu.edu.tw |
| 呂昱翰 (96) | Yu Han Lyu | g944352@oz.nthu.edu.tw | 張書豪 (96) | | u9013007@yuntech.edu.tw |
| 林國良 (96) | | g946308@oz.nthu.edu.tw | 邱玠欽 (96) | Chieh Chin Chiu | b9034018@student.nsysu.edu.tw |
| 蘇育仁 (96) | | yrsu@csie.nctu.edu.tw | 葉庭熙 (96) | | watermelon35@pchome.com.tw |
| 許晏彰 (96) | | arva.bt91@nctu.edu.tw | 呂紹甲 (96) | | g9562643@oz.nthu.edu.tw |
| 張志榮 (96) | | keith@ms4.url.com.tw | 黃名遠 (97) | | jeff74213@hotmail.com |
| 張光延 (97) | | arton0306@gmail.com | 呂紹甲 (98) | | |
| 盧振華 (98) | | walterlu21@yahoo.com.tw | 李道政 (99) | | lovearcueid@gmail.com |
| 康竹君 (99) | Jhu Jyun Kang | g9662584@oz.nthu.edu.tw | 蔡金良 (99) | | chinriryou@gmail.com |
| 黃詩涵 (99) | | denydie@hotmail.com | 蔡宗頷 (99) | | terrylexqq@gmail.com |
| 吳宗倫 (99) | | lun1116@yahoo.com.tw | 洪蔚奇 (99) | | wash878@hotmail.com  |
''Motif-based Analysis Reveals that Recombination has been involved in the Genome Evolution of the Multipartite Viruses, Banana bunchy top virus''
~Hsiang-Iu Wang, ~Chih-Hung Chang, ~Po-Heng Lin, ~Hui-Chuan Fu, ~ChuanYi Tang, ~Hsin-Hung Yeh
''Under Review''

>The CDS parser program is used to construct ~BBTV-genome coding region mimic sequence set

[[Download software|CDS_parser.rar]]
! 10 February 2006
實驗室於10月10日居辦團體出遊,地點是苗栗南庄。[[照片下載|LabPhoto/20071010LabOuting.zip]] (About 100 MB)

!10 February 2006
Some pictures were taken by AbnerCYH. It is just for fun. View [[2006-02-10|LabPhoto/2006-02-10/index.html]]

!17 February 2006
Pictures of 2006 Spring Banquet. View [[2006SpringBanquet|LabPhoto/2006SpringBanquet/index.html]]
[img[Prof. Tang|http://www.cs.nthu.edu.tw/image/professor/cytang_2.jpg]]
Chuan Yi Tang (唐傳義 教授), Professor of Department of Computer Science, National Tsing Hua University (NTHU)
* [[Personal Homepage|http://www.cs.nthu.edu.tw/~cytang/]]
* Tel: +886 3 5715131-1077
* Fax: +886 3 572-3694
* Email: cytang AT cs.nthu.edu.tw
* Interests: Algorithm design, Parallel algorithms, Protocol testing,Computational biology
* [[Courses]]
* [[Publications|http://alcat.pu.edu.tw/~research/search/index_search_result.html?department=72&teaname=axpaedpqzZezw0zw0zco]]

''Some Talks''
* [[An Introduction to Computational Biology Laboratory|Intro.ppt]]
''Underconstruction''

Please refer [[Here|http://www.cs.nthu.edu.tw/~cytang/Project.htm]]
''Underconstruction''

Please refer [[Here|http://www.cs.nthu.edu.tw/~cytang/Publications.htm]]
''LEAST Seminar'' focus on the related topics of algorithms.

[img[Prof. Lee|http://alg.csie.ncnu.edu.tw/PROFESSORS_photo/PROFESSORS_photo_1.jpg]]
Chairman: [[Prof. R. C. T. Lee|http://www.csie.ncnu.edu.tw/~rctlee/]]
Time: Friday, pm 7:00~9:00
Place: Room 550, CSEE Building, NTHU.

''[[The Schedlue of Presentation at LEAST Seminar|http://algorithm.cs.nthu.edu.tw/meeting/order.htm]]''
Computational Systems Biology and ~Bio-Medicine Laboratory
Explore the world by the power of computation
計算系統生物與醫學實驗室
! 30 April 2007

@@color(red): Mpeg4 Format: It needs Codec H.264 + accplusv2@@

There are some DVD videos for sharing with Labmates. The files are compressed by tar and gzip. 
* Talk Series: Systems Biology and Computational Biology
** [[Professor Hamid Bolouri|LabVideo/Prof.Hamid_Bolouri2006.mp4]]
** [[Professor Tatsuya Akutsu|LabVideo/Prof.Tatsuya_Akutsu2006.mp4]]
* [[An integrated computational approach to identifying regulating elements in yeast|http://algorithm.cs.nthu.edu.tw/LabVideo/Prof.Wen_Hsiung_Li2006.mp4]], Professor Wen Hsiung Li.
* Biology: How to Write NSC Proposal
** [[Prof. Hsu's Talk, 2006-11-16.|LabVideo/Writing_NSC_Proposal.Prof.Hsu.20061126.mp4]]
** [[Prof. Chen's Talk, 2006-11-24.|LabVideo/Writing_NSC_Proposal.Prof.Chen.20061124.mp4]]
** [[Prof. Chen's Talk, 2006-11-27.|LabVideo/Writing_NSC_Proposal.Prof.Hung.20061127.gz]]
''Welcome to the homepage of ''

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The Computational Systems Biology and ~Bio-Medicine Laboratory (CSBB Lab for short) of [[Department of Computer Science|http://www.cs.nthu.edu.tw/english/intro.html]], [[National Tsing Hua University|http://www.nthu.edu.tw/index-e/index.htm]], is founded and directed by [[Prof. Tang]].

For the coming Bio-tech. age, NTHU aims to bring together the research power of biology, mathematics, statistics, computer science, chemistry, and physics. NTHU plans to promote collaboration within the its area and beyond. 

Traditional approach of biology was not sufficient to morden research. CSBB Lab dedicated to investigate problems in molecular biology by applying computational and mathematical techniques. 

CSBB Lab consists of four WorkGroups; they cover fields of computer sicence and biology, e.g., analysis and design of algorithms, comparative genomics, systems biology. There is [[a slides|Intro.ppt]] which introduced our research in recent years 

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[[Prof. Tang]] has plentiful experiences to lead the cooperation of computer scientists and biologists. There are many different backgrounds students in our lab. Besides applying to graduate program of dept. of computer sicence , students who are interested in study biological information can join us via [[ISA|http://www.isa.nthu.edu.tw/]]. ISA provides graduate program of bioinformatics. The detailed information please refer [[清華大學電機資訊學院生物資訊學程簡介|http://www.isa.nthu.edu.tw/chinese/bioinfo.html]]. 



''What's Algorithm''
<<<
The word algorithm comes from the name of the 9th century Persian mathematician Abu Abdullah Muhammad bin Musa al-Khwarizmi. In mathematics and computer science an algorithm is a finite set of well-defined instructions for accomplishing some task which, given an initial state, will terminate in a corresponding recognizable end-state. Algorithms can be implemented by computer programs. (learn more on [[Wikipedia|http://en.wikipedia.org/wiki/Algorithms]])
<<<
''What's Systems biology''
<<<
Systems biology is the study of the interactions between the components of a biological system, and how these interactions give rise to the function and behaviour of that system (for example, the enzymes and metabolites in a metabolic pathway).

The systems biology approach often involves the development of mechanistic models, such as the reconstruction of dynamic systems from the quantitative properties of their elementary building blocks.
 (learn more on [[Wikipedia|http://en.wikipedia.org/wiki/Systems_biology]])
<<<
''What's Biocomputing''
<<<
Biocomputing is an multidisciplinary study of biology and computer science for the theory and application of computational methods in problems of biological problems, e.g., sequence alignment, protein structure alignment, protein structure prediction, prediction of gene expression and protein-protein interactions. (learn more on [[PSB|http://psb.stanford.edu/]])
<<<

[[Older Version|index.before.rename.html]] , [[Oldest Version|OldLabWeb/index.html]] of Lab homepage.
There are four sub-groups in our Lab.
*''[[Theory group|theory.html]]''
** Focus on theoretical aspect of biocomputing and computer science, i.e., analysis and design of algorithms.
*''[[GFESS group|GFESS.html]]''
** ''G''enomics, ''F''unction, ''E''volution, ''S''equence, ''S''tructure. We are developing tools that help enzyme biologists.
** An introductory [[slides|http://www.slideshare.net/cytang/2009-csbb-lab-1762805]] 
*''[[Systems Biology group|sysbio.html]]''
** Focus on construction and experimental validation of models that explain and predict the behavior of biological systems.
** An introductory [[slides|http://www.slideshare.net/cytang/2009-csbb-lab-1758051]]